1. Academic Validation
  2. Probing the Dominant Motifs within the Hydrophobic Channel Yields Oxadiazole-Containing Diarylpyrimidine Derivatives as Potent HIV-1 Non-Nucleoside Reverse Transcriptase Inhibitors

Probing the Dominant Motifs within the Hydrophobic Channel Yields Oxadiazole-Containing Diarylpyrimidine Derivatives as Potent HIV-1 Non-Nucleoside Reverse Transcriptase Inhibitors

  • J Med Chem. 2025 Aug 14;68(15):16197-16211. doi: 10.1021/acs.jmedchem.5c01102.
Tao Zhang 1 Yue Yang 1 Xin Li 1 Fabao Zhao 1 Zongji Zhuo 1 Le Wang 1 Wenbo Zhang 1 Erik De Clercq 2 Christophe Pannecouque 2 Peng Zhan 1 3 Dongwei Kang 1 3 Xinyong Liu 1 3
Affiliations

Affiliations

  • 1 Department of Medicinal Chemistry, Key Laboratory of Chemical Biology (Ministry of Education), School of Pharmaceutical Sciences, Cheeloo College of Medicine, Shandong University, 44 West Culture Road, Jinan, Shandong 250012, P.R. China.
  • 2 Rega Institute for Medical Research, Laboratory of Virology and Chemotherapy, K.U. Leuven, Herestraat 49 Postbus 1043 (09.A097), Leuven B-3000, Belgium.
  • 3 China-Belgium Collaborative Research Center for Innovative Antiviral Drugs of Shandong Province, 44 West Culture Road, Jinan, Shandong 250012, P.R. China.
Abstract

To develop effective non-nucleoside Reverse Transcriptase inhibitors (NNRTIs) with improved antidrug resistance profiles and drug-like properties, a series of novel diarylpyrimidine derivatives targeting the hydrophobic domain of the NNRTI-binding pocket was strategically designed, synthesized, and evaluated. Following structural optimization, 18e (EC50 = 5.06-54.0 nM) emerged as the most potent inhibitor against wild-type and NNRTI-resistant strains, comparable to ETR (EC50 = 3.79-51.8 nM). In particular, for Y188L and RES056 mutant strains, 18e (EC50(Y188L) = 24.2 nM, RF = 4.79/EC50(RES056) = 54.0 nM, RF = 10.7) showed improved antiresistance profiles versus ETR (EC50(Y188L) = 23.4 nM, RF = 6.18/EC50(RES056) = 51.8 nM, RF = 13.7). Molecular simulation studies indicated that the 1,3,4-oxadiazolylpyridine motif was essential for binding to Reverse Transcriptase. Moreover, 18e exhibited promising pharmacokinetic properties (T1/2 = 2.35 h, F = 14.4%) and safety (LD50 < 2000 mg/kg), positioning it as a promising anti-HIV-1 drug candidate.

Figures
Products