1. Academic Validation
  2. AI-Driven Discovery and Optimization of Positive Allosteric Modulators for NMDA Receptors: Potential Applications in Depression

AI-Driven Discovery and Optimization of Positive Allosteric Modulators for NMDA Receptors: Potential Applications in Depression

  • J Med Chem. 2025 Aug 14;68(15):16260-16283. doi: 10.1021/acs.jmedchem.5c01173.
Tingting Yang 1 Tianrui Xiong 1 Yixiao Wang 2 Bin Xi 1 3 Ruyun Liu 2 Zihan Wang 1 Wenyu Zhu 1 Dehua Lu 1 Zhongwei Wang 1 Zhenming Liu 1 Zhuo Huang 1 4 Lin Ma 2 Juan Du 2 Zhongtang Li 1 Liangren Zhang 1
Affiliations

Affiliations

  • 1 State Key Laboratory of Natural and Biomimetic Drugs, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China.
  • 2 School of Pharmacy, Ningxia Medical University, Shengli Street 1160, Yinchuan 750004, China.
  • 3 Beijing StoneWise Technology Co Ltd., Haidian Street #15, Beijing 100080, China.
  • 4 Ningbo Institute of Marine Medicine, Peking University, Ningbo 315832, China.
Abstract

N-Methyl-d-aspartate receptors (NMDARs) are extensively distributed throughout the central nervous system (CNS), and their dysfunction is implicated in depressive disorder. Positive allosteric modulators (PAMs) enhance the receptor's sensitivity and activity to agonists without direct activation. In this study, using structure-based virtual screening and artificial intelligence (AI)-assisted optimization, we identified Y36, a benzene-substituted piperidinol derivative and potent GluN2A-selective PAM. Y36 showed higher efficacy (Emax = 397.7%) than GNE-3419 (Emax = 196.4%), reducing the EC50 values and increasing the Emax values for glutamate/glycine at GluN2A receptor. In chronic restraint stress (CRS) mice, Y36 significantly alleviated depression-related behaviors in multiple behavioral assessments, highlighting its superior antidepressant effects. Preliminary studies also confirmed favorable pharmacokinetic (PK) profiles and blood-brain barrier (BBB) penetration for Y36, with no signs of addiction, weight gain, or organ and tissue damage in mice. These results suggest that Y36 offers promising potential as a novel antidepressant with multiple antidepressant-like properties.

Figures
Products