1. Academic Validation
  2. Design and SAR Analysis of Phenylboronic Acid-Based Inhibitors for Sensitizing KPC-2-Producing Klebsiella pneumoniae to β-Lactam Antibiotics

Design and SAR Analysis of Phenylboronic Acid-Based Inhibitors for Sensitizing KPC-2-Producing Klebsiella pneumoniae to β-Lactam Antibiotics

  • J Med Chem. 2025 Jul 10;68(13):13421-13435. doi: 10.1021/acs.jmedchem.5c00058.
Mangal Singh 1 Marc Boomgaren 2 Perwez Bakht 1 Patrick Ihle 2 Hanna-Kirsti S Leiros 2 Annette Bayer 2 Ranjana Pathania 1
Affiliations

Affiliations

  • 1 Department of Biosciences and Bioengineering, Indian Institute of Technology Roorkee, Roorkee, Uttarakhand 247667, India.
  • 2 Department of Chemistry, UiT the Arctic University of Norway, Tromsø 9037, Norway.
Abstract

The global threat posed by multidrug-resistant bacteria, particularly those producing KPC-2 carbapenemases, has compromised the effectiveness of carbapenems, the last-resort Antibiotics. To address this, we utilized a bioisosteric replacement approach to synthesize phenylboronic acid (PBA) derivatives targeting KPC-2. The enzyme kinetics study revealed that electron-withdrawing substituents enhanced the residence time of lead compounds, enhancing KPC-2 inhibition. Lead molecule 3b, in synergy with Meropenem, achieved a 3-log CFU/mL reduction in Bacterial count within 3 h in time-kill kinetics and exhibited a postantibiotic effect of 71 ± 5 min. A nanomolar range inhibition constant (Ki), a second-order inactivation rate constant (k2/K) of ∼103 M-1 s-1, and a slow off-rate (koff ∼ 0.0018 s-1) were observed. Importantly, the PBA derivatives were nontoxic to human cells and significantly reduced lung Bacterial load in a murine pneumonia model. Overall, PBA-based non-β-lactam β-lactamase inhibitors showed promise in restoring carbapenem efficacy against KPC-2-producers.

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