1. Academic Validation
  2. The C-terminal Kinase Domain-Binding and Suppression Motif Prevents Constitutive Activation of FGFR2

The C-terminal Kinase Domain-Binding and Suppression Motif Prevents Constitutive Activation of FGFR2

  • Cancer Res. 2025 Jun 24. doi: 10.1158/0008-5472.CAN-24-3349.
Daniel Zingg 1 Chi-Chuan Lin 2 Julia Yemelyanenko 3 Lukasz Wieteska 4 Sjors M Kas 3 Onno B Bleijerveld 5 Xue Chao 6 Jinhyuk Bhin 7 Catrin Lutz 3 Ellen Wientjens 3 Sjoerd Klarenbeek 8 Giulia Zanetti 3 Stefano Annunziato 3 Bjørn Siteur 9 Eline van der Burg 3 Anne Paulien Drenth 3 Marieke van de Ven 3 Lodewyk F A Wessels 10 Maarten Altelaar 11 John E Ladbury 2 Jos Jonkers 3
Affiliations

Affiliations

  • 1 Genentech, United States.
  • 2 University of Leeds, Leeds, United Kingdom.
  • 3 The Netherlands Cancer Institute, Amsterdam, Netherlands.
  • 4 University of Pittsburgh, United States.
  • 5 The Netherlands Cancer Institute, Amsterdam, Noord-Holland, Netherlands.
  • 6 Sun Yat-sen University Cancer Center, Guangzhou, State..., China.
  • 7 Netherlands Cancer Institute-Antoni van Leeuwenhoek Hospital, Seoul, Korea (South), Republic of.
  • 8 Royal GD (Netherlands), Deventer, Netherlands.
  • 9 The Netherlands Cancer Institute (NKI), Amsterdam, Netherlands.
  • 10 The Netherlands Cancer Institute, Amsterdam, NH, Netherlands.
  • 11 Utrecht University, Utrecht, Netherlands.
Abstract

Genetic alterations in receptor tyrosine kinase (RTK) genes can generate potent oncogenic drivers. Truncation of the Fibroblast Growth Factor receptor 2 (FGFR2) gene by its last exon 18 (E18) is caused by structural alterations, such as focal amplifications and gene fusions/rearrangements, as well as by mutations. All the E18-truncating FGFR2 variants (FGFR2ΔE18) act as strong driver alterations in Cancer, and they commonly encode a receptor lacking the carboxy (C)-terminal tail. Here, we analyzed a compendium of Fgfr2-E18 variants to uncover the mechanism by which loss of the C-tail renders FGFR2 oncogenic. While permutation of previously annotated C-terminal FGFR motifs did not recapitulate the tumorigenicity of FGFR2ΔE18, the functional annotation efforts led to the discovery of a C-terminal phenylalanine-serine motif that mediates binding of the C-tail to the kinase domain and thereby suppresses FGFR2 kinase activity. Permutation of this kinase domain-binding and suppression (KDBS) motif in conjunction with Other FGFR2-regulatory C-terminal sites fully phenocopied the oncogenic competence of FGFR2ΔE18. Together, these findings delineate how the C-terminal tail prevents FGFR2 from aberrant oncogenic activation.

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